Services and Databases Maintained at CIBIV

• FACT
  A Feature Architecture Comparison Tool to search for functionally equivalent proteins.
  FACT is accessible at www.cibiv.at/FACT.

• HaMSTR
  HaMSTR is a Hidden Markov Model based search tool to screen EST sequence data for the presence of putative orthologs to a pre-defined set of genes.
  HaMSTR is accessible at www.deep-phylogeny.org/hamstr.

• HvrBase
  A compilation of human and ape mtDNA control region sequences.
  HvrBase is accessible at www.hvrbase.org and www.hvrbase.de.

• HOINVGEN (in collaboration with PBIL, Lyon)
  A database of homologous invertebrate genes, structured under the ACNUC sequence database management system.
  HOINVGEN is accessible at http://pbil.univ-lyon1.fr/databases/hoinvgen/HOINVGEN.html.

• TBPT Explorer
  A tool to visually analyze TonB-dependent transporters and their occurrence in cyanobacteria.
  The TBDT Explorer is accessible at www.cibiv.at/TBDT.

• Web-PDA
  A user-friendly web-interface to the PDA program to analyze phylogenetic diversity based on trees or networks.
  Web-PDA is accessible at www.cibiv.at/software/pda/web-pda.