Center for Integrative Bioinformatics Vienna
Max F. Perutz Laboratories
Dr. Bohr Gasse 9
A-1030 Vienna, Austria
Services and Databases Maintained at CIBIV
FACT
A Feature Architecture Comparison Tool to search for functionally equivalent proteins.
FACT is accessible at
www.cibiv.at/FACT.
HaMSTR
HaMSTR is a Hidden Markov Model based search tool to screen EST sequence data for the presence of putative orthologs to a pre-defined set of genes.
HaMSTR is accessible at
www.deep-phylogeny.org/hamstr.
HvrBase
A compilation of human and ape mtDNA control region sequences.
HvrBase is accessible at
www.hvrbase.org and
www.hvrbase.de.
TBPT Explorer
A tool to visually analyze TonB-dependent transporters and their occurrence in cyanobacteria.
The TBDT Explorer is accessible at
www.cibiv.at/TBDT.
Web-PDA
A user-friendly web-interface to the PDA program to analyze phylogenetic diversity based on trees or networks.
Web-PDA is accessible at
www.cibiv.at/software/pda/web-pda.