PluMiST - Plus and Minus SuperTrees
PluMiST is a computer program to reconstruct and evaluate
majority rule supertrees: MR(-), MR(+) and MR(+)g. It searches
tree space by NNI (nearest-neighbor interchange) and TDR
(taxa-deletion-reinsertion). Only fully resolved input
and supertrees are considered, multifurcating trees may be returned as
the strict consensus of equally best scoring trees.
Further details on the use of the program can be found in the manual (pdf).
The python code to run the program can be downloaded here (note there is
only a version for python 2.x not for python 3.x):
For Python 2.x from python 2.4 upwards (zip)