Former Members

Vienna :: since 2005

Olga Chernomor
PhD Student, Post-Doc
Oct. 2011-Nov. 2021
Phylogenomics
Egor Kiselev
Post-Doc
Mar. 2021-Oct. 2021
Florian Pflug
PhD Student, Post-Doc
July 2015-Oct. 2021
Correctly counting molecules using unique molecular identifiers
Silvia Madritsch
PhD Student
Mar. 2018-Feb. 2021
Comparative transcriptomics of non-model plant organisms
Tatsiana Hofer
PhD Student
Jan. 2018-Oct. 2020
Lukasz Reszczynski
PhD Student
May 2018-May 2019
Stephen Crotty
Post-Doc
Sep. 2016-Aug. 2019
Luis Felipe Paulin Paz
PhD Student
Apr. 2014-Mar. 2019
Understanding the sampling properties of high throughput sequencing technologies
Milica Krunic
PhD Student, Post-Doc
Apr. 2011-Jan. 2019
NGS data analysis in resolving disease etiology
Chan Dat Dennis Huyen
Master Student
Oct. 2018-Jul. 2019
Nuclei segmentation in fluorescence images using deep learning (Master thesis)
Miguel Gallach
Post-Doc
Jan. 2012-Dec. 2018
Benoit Schroeder
Master Student
Oct. 2017-Nov. 2018
Organoid CRISPR screen analysis pipeline
Bui Quang Minh
PhD Student, Post-Doc
Jan. 2006-Jan. 2018
Computational methods in biodiversity conservation
Philipp Rescheneder
Master Student, PhD Student
2009-2017
OpenCL based sequence alignment algorithms, optimized for next generation sequencing data (Master thesis)
Philip Stevens
PhD Student
2013-2017
Establishment of a quantitative score for liquid biopsy in sepsis diagnostics
Konstantina Kyriakouli
PhD Student
2013-2017
Diep Thi Hoang
PhD Student
2014-2017
Cassius Manuel Perez de los Cobos Hermosa
Master Student (ext)
Feb. 2016-Mar. 2017
Mathematical topics in phylogenetics (Master Thesis)
Moritz Smolka
BSc. Student
2015-2017
Jana Trifinopoulos
Master Student
2015
Large-scale phylogenetic inference for simulated HIV epidemics (Master thesis)
Lam-Tung Nguyen
Diploma, PhD Student, Post-Doc
Sep. 2008-Aug. 2016
An Efficient Algorithm for Phylogeny Reconstruction by Maximum Likelihood (Master thesis),
Computational methods for fast and accurate phylogenetic inference
Tobias Kaiser
Post-Doc
Sep. 2014-Aug. 2016
Susanne Pfeifer
Post-Doc
Jan. 2013-Mar. 2015
Fritz Sedlazeck
PhD Student, Post-Doc
Sep. 2008-Dec. 2014
Benchtop sequencing on benchtop computers
Maurits Evers
Post-Doc
Sep. 2014-Feb. 2015
Christian Harlander
System Administrator
Mar. 2014-Feb. 2015
Haris Vikalo
Senior Scientist
Jul. 2014-Dec. 2014
Peter Venhuizen
Master Student
Jan. 2014-Sep. 2014
Niko Popitsch
Master student, Post-Doc
Jan. 2012-Aug. 2014
A novel compression approach for mapped high-throughput sequencing data set (Master thesis)
Mikhail Okun
PhD Student
Dec. 2010-Apr. 2014
Molecular Phylogeny and Taxonomy of the Physarum notabile Species Complex (Myxomycetes)
Stefanie Tauber
PhD Student & Post-Doc
Jan. 2010-Mar. 2014
Exploring the transcriptome
Steven Müller
System Administrator
Mar. 2012-Feb. 2014
Manuel Gil
Post-Doc
Aug. 2012-Jul. 2013
Tina Köstler
PhD Student
Nov. 2008-Apr. 2012
Domains, Proteins, and Evolution
Wolfgang Fischl
System Administrator
2008-Mar. 2013
Dinh Quang Huy
PhD Student
Mar. 2008-Dec. 2012
Bioinformatic tools for analyzing epigenomic profiling data
Dennis Haake
Bachelor Student
Jul. 2012-Aug. 2012
Ingo Ebersberger
Post-Doc
Jan. 2006-Jun. 2012
Jovana Nolic
Secretary
Jan. 2009-Mar. 2012
Peter Schmitzberger
Master Student
Jul. 2010-Sep. 2012
A phylogenetic pipeline for prediction of orthologous genes (Master thesis)
Tobias Neumann
Master Student
Jul. 2010-Sep. 2012
Challenges of de-novo assembling the transcriptome of Idiosepius pygmaeus for novel gene identification (Master thesis)
Mareike Fischer
Post-Doc
May 2009-Mar. 2012
Nguyen Thi Minh Anh
PhD Student & Post-Doc
Jan. 2006-Feb. 2012
Goodness of fit and robustness of phylogenetic methods in the light of intermittent evolution
Natasa Peric
Secretary
Jan. 2006-Jul. 2011
Tanja Gesell
PhD Student & Post-Doc
May 2005-Nov. 2011
A phylogenetic definition of structure
Rikard Erlandsson
Senior Scientist
Sep. 2010-Feb. 2011
Sascha Strauss
PhD Student
Jan. 2006-Sep. 2010
Addressing biological questions with massive sequence data
Ricardo de Matos Simoes
PhD Student
May 2005-Sep. 2010
Species-specific evolving regions in the human and chimpanzee genomes
Anne Kupczok
PhD Student
Nov. 2006-Sep. 2010
Postprocessing phylogenies
Pham Minh Phuong
Bachelor Student
Mar. 2008-Jun. 2010
Manuela Machatti
Master student
Sep. 2008-Dec. 2009
Greg Ewing
Post-Doc
Jul. 2006-Jun. 2009
Michael Sonntag
Bachelor student
Jul. 2009-Aug. 2009
Bioinformatics analysis of interacting amino acids at 2APro cleavage site of Human Rhinovirus polyprotein
Sascha Kastens
Bachelor student
Mar. 2009-Jul. 2009
Analyse der Migration von HIV zwischen Zentralafrikanischen Ländern
Martin Grabner
Post-Doc
Sep. 2005-Mar. 2009
Steffen Klaere
Post-Doc
May 2005-Oct. 2008
Martina Kutmon
Bachelor student
Mar. 2008-Dec. 2008
Detection of Recombination Events in DNA Sequences
Andrea Führer
PhD student
Jan. 2006-Dec. 2007
Maximum Likelihood Estimation of Gene Family Specific Duplication and Deletion Rates
Stephan Zanger
PhD student
Feb. 2006-Sep. 2007
Dao Vinh Khiem
Master student
May 2006-May 2007
Thomas Wölfel
PhD student
May 2006-Sep. 2006
Matthias Dehmer
Post-Doc
Jul. 2006-Feb. 2007

Düsseldorf :: 2001-2005

Simone Linz
PhD student
Oct. 2004-Apr. 2008
Reticulation in Evolution
Michael Rosskopf
PhD student
Oct. 2003-Jun. 2007
Development and Applications of Neutral Models for Evolution of Gene Expression
Markus Junge
Diploma student
Sep. 2004-Jan. 2006
Vinh Le Sy
PhD student
Jan. 2003-Sep. 2005
Phylogeny Reconstructions Come of Age
Sebastian Peslak
Bachelor student
Aug. 2005-Nov. 2005
Katrin Zeiss
Bachelor student
Aug. 2005-Oct. 2005
Jutta Buschbom
Post-Doc
Jul. 2003-Jun. 2005
Thomas Schlegel
PhD student
2003-Jun. 2007
Inferring Secondary Structure from RNA Alignments and their Trees
Achim Radtke
Post-Doc
Apr. 2002-Mar. 2005
Gunter Weiss
Juniorprofessor
Jan. 2002-Mar. 2005
Dorit Liebers
Post-Doc
May 2000-Dec. 2003

Leipzig :: 1998-2001

Roland Fleißner
PhD student
Jan. 1998-Sep. 2003
Sequence alignment and phylogenetic inference
Eckhart Petzold
Diploma student
Dec. 2002-Jun. 2003
Efficient Parameter Estimation for Maximum Likelihood Reconstruction of Phylogenetic Trees (Master thesis)
Thomas Schlegel
Diploma student
Sep. 2001-Mar. 2002
Sonja Meyer
PhD student
Jan. 1998-Feb. 2002
Estimation of site specific substitution rates
Martin Beck
Diploma student
Oct. 2001-Apr. 2002
Gunter Weiss
Post-Doc
Dec. 1997-Dec. 2001
Sebastian Zöllner
PhD student
Jan. 1998-Feb. 2001
Population-based Gene Mapping Using Linkage Disequilibrium
Gangolf Jobb
PhD student
May 2000-Jan. 2001
Dorit Liebers
Post-Doc
May 2000-Dec. 2003
Dirk Metzler
Post-Doc
Aug. 1999-Apr. 2000
Nicholas Grassly
Post-Doc
Aug. 1998-Aug. 1999

Munich :: 1991-1998

Gunter Weiss
PhD student
Jan. 1995-Nov. 1997
Coalescent analysis of nonrecombining DNA sequence data
Gangolf Jobb
Diploma student
Apr. 1998-Feb. 1999
Eine Maximum-Likelihood-Methode zum Aufspüren phylogenetischer Inhomogenitäten in molekularen Datensätzen (Master thesis)
Korbinian Strimmer
PhD student
Feb. 1995-Dec. 1997
Maximum likelihood methods in molecular phylogenetics
Ellen Baake
Post-Doc
Nov. 1996-Oct. 1998
Sonja Meyer
Diploma student
Jan. 1997-Oct. 1997
Auswertung einer Sammlung menschlicher mitochondrialer Sequenzen (Master thesis)
Roland Fleißner
Diploma student
Jan. 1997-Oct. 1997
RNA Sekundärstrukturen und die Rekonstruktion phylogenetischer Bäume (Master thesis)
Katja Nieselt-Struwe
Post-Doc
Jan. 1997-Jun. 1997
Johannes Schäfer
Post-Doc
Jan. 1997-Jun. 1997
Florian Burckhardt
Diploma student
Jun. 1996-Feb. 1997
Auswertung der Abundanzen ausgewählter Planktongruppen in parallel angesetzten Mikrokosmen mittels theoretischer Methoden (Master thesis)
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