Stefanie Tauber

Research Interests:

• Quality control and exploratory data analysis of NGS data
• Finite mixture models in application to microarray data
• Cross-species/tumor-stroma interaction models
• ...

Short Vita:

Education:

• 2008: Vienna University of Technology, Applied Mathematics,
• 2002: Bundesgymnasium Berndorf, Matura

Professional Experience:

• 01/2010 -              : PhD student at the Center for Integrative Bioinformatics Vienna (CIBIV)
• 10/2007 - 12/2009: DNA-Microarray Facility - Ludwig Boltzmann Institute for clinical & experimental Oncology, Austria
• 05/2005 - 07/2005: CYMMIT - International Maize and Wheat Improvement Center, Mexico
• 03/2005 - 09/2005: ARC - Austrian Research Centers Seibersdorf: Statistical consulting with respect to microarray data

Degree:

• 'Dipl.Ing.' (2008), Vienna University of Technology
  Thesis: Quality Assessment, Normalisation and Mixed Effects Models for Microarray Data: Application to a Sweet Potato Study.
  Supervisor: Prof. Dr. Friedrich Leisch

Publications

• M. Bilban, S. Tauber, P. Haslinger, J. Pollheimer, L. Saleh, H. Pehamberger, O. Wagner, M. Knoefler (2010) Trophoblast invasion: Assessment of cellular models using gene expression signatures. Placenta, DOI: doi:10.1016/j.placenta.2010.08.011
• S. Tauber, A. Jais, M. Jeitler, S. Haider, J. Husa, J. Lindroos, M. Knoefler, M. Mayerhofer, H. Pehamberger, O. Wagner, and M. Bilban (2010) Transcriptome analysis of human cancer reveals a functional role of Heme Oxygenase-1 in tumor cell adhesion. Molecular Cancer, DOI: 10.1186/1476-4598-9-200
• M. Mair, G. Zollner, D. Schneller, M. Musteanu, P. Fickert, J. Gumhold, C. Schuster, A. Fuchsbichler, M. Bilban, S. Tauber, H. Esterbauer, L. Kenner, V. Poli, L. Blaas, J. W. Kornfeld, E. Casanova, W. Mikulits, M. Trauner, and R. Eferl (2010) Signal Transducer and Activator of Transcription 3 Protects From Liver Injury and Fibrosis in a Mouse Model of Sclerosing Cholangitis. Gastroenterology, 138(7), 2499-2508 DOI: 10.1053/j.gastro.2010.02.049
• S. Blüml, N. B. Binder, B. Niederreiter, K. Polzer, S. Hayer, S. Tauber, G. Schett, C. Scheinecker, G. Kollias, E. Selzer, M. Bilban, J. S. Smolen, G. Superti-Furga, and K. Redlich (2010) Anti-inflammatory effects of TNF on hematopoietic cells in the development of erosive arthritis. Arthritis & Rheumatism, 62(6), 1608-1619 DOI: 10.1002/art.27399
• M. Musteanu, L. Blaas, M. Mair, M. Schlederer, M. Bilban, S. Tauber, H. Esterbauer, M. Mueller, E. Casanova, L. Kenner, V. Poli, and R. Eferl (2009) Stat3 Is a Negative Regulator of Intestinal Tumor Progression in Apc^Min Mice. Gastroenterology, 138(3), 1003-1011. DOI: 10.1053/j.gastro.2009.11.049
• I. Astapova, L.J. Lee, C. Morales, S. Tauber, M. Bilban, and A.N. Hollenberg (2008) The nuclear CoRepressor, NCoR, regulates thyroid hormone action in vivo. Proc. Natl. Acad. Sci. U.S.A., 105(49), 19544-19549. DOI: 10.1073/pnas.0804604105
• S. Fluch, C. C. Olmo, S. Tauber, M.Stierschneider, D. Kopecky, T. G. Reichenauer, and I. Matusíková (2008) Transcriptomic changes in wind-exposed poplar leaves are dependent on developmental stage. Planta, 28(5):757-764 DOI: 10.1007/s00425-008-0777-2

Talks

• Coconuts - Classification of Coverage Patterns by Using Time Series Based Estimators
  Mini-Symposium & Workshop on Next Generation Sequencing, Vienna, Austria, 2011-11-28
• Classification of Coverage Patterns
  UseR, Warwick, Great Britain, 2011-8-16
• Classification of Coverage Patterns
  StatSeq Working Group 1 Meeting, Vienna, Austria, 2011-03-25
• Analysis of a NGS Time Course Experiment
  Bioconductor Developer Meeting Europe, Heidelberg, Germany, 2010-11-17

Addresses

Postal Address:

Stefanie Tauber - Last Change: 30.Nov.2011 .