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Max F. Perutz Laboratories
Dr. Bohr Gasse 9
A-1030 Vienna, Austria
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Celine Prakash

Celine Prakash


Research Interests:

  • Modelling of Coverage in RNA Sequencing
  • Estimating the number of molecules of a transcript from RNA Sequencing

Short Vita:

Education:

  • 2010: Nanyang Technological University, Singapore, M.Sc in Bioinformatics
  • 2008: Nanyang Technological University, Singapore, B.Eng in Bioengineering

Professional Experience:

  • Nov2012-present: PhD student at the Center for Integrative Bioinformatics Vienna (CIBIV)
  • Jun2010-Sep2012: Bioinformatician at the Singapore Immunology Network, A*Star
  • Feb2009-Jul2009: Research Officer at the Singapore Immunology Network, A*Star
  • Aug2008-Oct2008: Intern at the Center for for Molecular and Biomolecular Informatics, Nijmegen Center for Molecular Life Sciences, Netherlands

Degree:

  • 'M.Sc.' (2010), School of Computer Engineering, Nanyang Technological University, Singapore
    Thesis: IDENTIFICATION OF TRANSCRIPTIONAL REGULATORY MECHANISMS BY INTEGRATION OF MULTIPLE CHIP-SEQ AND GENE EXPRESSION DATA ACROSS DIFFERENT CELL TYPES

Publications

2012
  • W.S. Zhang, C. Prakash, C. Sum, Y. Gong, Y. Li, J.J. Kwok, N. Thiessen, S. Petterson, S.J. Jones, S. Knapp, H. Yang and K.C. Chin (2012) Bromodomain-Containing-Protein 4 (BRD4) Regulates RNA Polymerase II Serine 2 Phosphorylation in Human CD4+ T Cells. J. Biol. Chem.. (DOI: [Epub ahead of print], PMID: 23086925)
  • M. Liu, C. Prakash, A. Nauta, R.J. Siezen and C. Francke (2012) Computational analysis of cysteine and methionine metabolism and its regulation in dairy starter and related bacteria. J. Bacteriol.. (DOI: 10.1128/JB.06816-11, PMID: 22522891)
2011
  • C.Y. Lee, Y.W. Kam, J. Fric, B. Malleret, E.G. Koh, C. Prakash, W. Huang, W.W. Lee, C. Lin, R.T Lin, L. Renia, C.I. Wang, L.F. Ng and L. Warter (2011) Chikungunya virus neutralization antigens and direct cell-to-cell transmission are revealed by human antibody-escape mutants. PLoS Pathog.. (DOI: 10.1371/journal.ppat.1002390, PMID: 22144891)
2010
  • J. Eyles, A.L. Puaux, X. Wang, B. Toh, C. Prakash, M. Hong, T.G. Tan, L. Zheng, L.C. Ong, Y. Jin, M. Kato, A. Prévost-Blondel, P. Chow, H. Yang and J.P. Abastado (2010) Tumor cells disseminate early, but immunosurveillance limits metastatic outgrowth, in a mouse model of melanoma. J Clin Invest.. (DOI: 10.1172/JCI42002, PMID: 20501944)
2008
  • J. Hao, Y. Yao, R.R. Varshney, L. Wang, C. Prakash, H. Li and D.A. Wang (2008) Gene transfer and living release of transforming growth factor-beta3 for cartilage tissue engineering applications. Tissue Eng Part C Methods.. (DOI: 10.1089/ten.tec.2008.0163, PMID: 18771416)

Addresses

Celine Prakash

Center for Integrative Bioinformatics Vienna (CIBIV)
(CIBIV is a joint institute of Vienna University, and Medical University, Vienna, Austria)
Max F. Perutz Laboratories (MFPL)
Campus Vienna Biocenter 5 (VBC5), Ebene 1, Room 1812.3
A-1030 Wien, Austria
Phone: ++43 +1 / 4277-74328
Email: celine.prakash(AT)univie.ac.at

Postal Address:

Center for Integrative Bioinformatics Vienna (CIBIV)
Max F. Perutz Laboratories (MFPL)
Dr. Bohr Gasse 9
A-1030 Wien, Austria



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