http://www.molgen.mpg.de/~hschmidt/veme/
Copy the data to your local drive!!!
- Which of these two alignment is more useful for phylogenetic analysis?
- test46-1701.phy
- test64-384.phy
- Try to find out whether sequence 1 (SouthCarolina1918) clusters with
human (h*), swine (s*), or avian (a*) viruses.
flu-a-1000.phy
- Evaluate and test the trees in flu-a-1000.trees
(with the alignment file flu-a-1000.phy).
Is there a clearly supported trees?
- Run an analysis of pol.phy.
Identify the the outlyer and remove it.